Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03825 | Not Available | + | 4291002 - 4291223 | 8638.71 |
| hypothetical protein | HMPREF1064_03826 | Not Available | + | 4291220 - 4292485 | 49610.9 |
| Trna-ala | Not Available | Not Available | + | 4292539 - 4292612 | Not Available |
| hypothetical protein | HMPREF1064_03827 | Not Available | - | 4293431 - 4293640 | 7934.52 |
| hypothetical protein | HMPREF1064_03828 | Not Available | - | 4293810 - 4294124 | 11488.3 |
| hypothetical protein | HMPREF1064_03829 | Not Available | + | 4294373 - 4294855 | 18388.1 |
| hypothetical protein | HMPREF1064_03830 | Not Available | + | 4294923 - 4296242 | 49818.3 |
| hypothetical protein | HMPREF1064_03831 | Not Available | + | 4296556 - 4298220 | 62538.1 |
| octanoyltransferase | HMPREF1064_03832 | Not Available | - | 4298423 - 4299511 | 40808.4 |
| hypothetical protein | HMPREF1064_03833 | Not Available | + | 4299577 - 4300278 | 27634.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
