Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03720 | Not Available | + | 4221271 - 4223481 | 81864.5 |
| mannonate dehydratase | HMPREF1064_03721 | Not Available | - | 4223464 - 4224642 | 44791.9 |
| pullulanase, type i | HMPREF1064_03722 | Not Available | - | 4224703 - 4226697 | 74595.6 |
| crossover junction endodeoxyribonuclease ruvc | HMPREF1064_03723 | Not Available | - | 4226702 - 4227271 | 21117.3 |
| hypothetical protein | HMPREF1064_03724 | Not Available | - | 4227268 - 4227573 | 11955.3 |
| hypothetical protein | HMPREF1064_03725 | Not Available | - | 4228233 - 4229033 | 30685.9 |
| hypothetical protein | HMPREF1064_03726 | Not Available | - | 4229201 - 4229623 | 16590.9 |
| hypothetical protein | HMPREF1064_03727 | Not Available | - | 4229620 - 4230039 | 16153.2 |
| hypothetical protein | HMPREF1064_03728 | Not Available | - | 4230080 - 4230361 | 10980.8 |
| hypothetical protein | HMPREF1064_03729 | Not Available | - | 4230364 - 4230906 | 20069.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
