Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | HMPREF1064_03710 | Not Available | - | 4208982 - 4211810 | 105909.0 |
| hypothetical protein | HMPREF1064_03711 | Not Available | + | 4211965 - 4213773 | 68545.0 |
| hypothetical protein | HMPREF1064_03712 | Not Available | + | 4213773 - 4214456 | 25730.9 |
| hypothetical protein | HMPREF1064_03713 | Not Available | - | 4214565 - 4215017 | 16871.5 |
| hypothetical protein | HMPREF1064_03714 | Not Available | - | 4215267 - 4215602 | 12965.3 |
| outer membrane assembly lipoprotein yfio | HMPREF1064_03715 | Not Available | - | 4215619 - 4216455 | 32450.3 |
| uvrabc system protein b | HMPREF1064_03716 | Not Available | + | 4216622 - 4218655 | 77662.6 |
| hypothetical protein | HMPREF1064_03717 | Not Available | - | 4218734 - 4219747 | 38637.0 |
| hypothetical protein | HMPREF1064_03718 | Not Available | - | 4219939 - 4220541 | 22779.6 |
| hypothetical protein | HMPREF1064_03719 | Not Available | - | 4220575 - 4221063 | 18689.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
