Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| precorrin-6y c5,15-methyltransferase (decarboxylating), cbie subunit | HMPREF1064_03673 | Not Available | + | 4167606 - 4168787 | 44283.8 |
| precorrin-4 c11-methyltransferase | HMPREF1064_03674 | Not Available | + | 4168809 - 4170620 | 67151.5 |
| cobalamin biosynthesis protein cbid | HMPREF1064_03675 | Not Available | + | 4170646 - 4172442 | 66106.2 |
| hypothetical protein | HMPREF1064_03676 | Not Available | - | 4172461 - 4173483 | 37669.9 |
| hypothetical protein | HMPREF1064_03677 | Not Available | - | 4173483 - 4174520 | 36729.8 |
| hypothetical protein | HMPREF1064_03678 | Not Available | - | 4174532 - 4175683 | 43231.0 |
| precorrin-2 c20-methyltransferase | HMPREF1064_03679 | Not Available | + | 4175787 - 4176515 | 27531.3 |
| hypothetical protein | HMPREF1064_03680 | Not Available | - | 4176478 - 4176891 | 15692.6 |
| altronate oxidoreductase | HMPREF1064_03681 | Not Available | - | 4176990 - 4178429 | 53935.1 |
| uronate isomerase | HMPREF1064_03682 | Not Available | + | 4178755 - 4180161 | 54308.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
