Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03653 | Not Available | - | 4141932 - 4142045 | 4416.31 |
| hypothetical protein | HMPREF1064_03654 | Not Available | - | 4142076 - 4143311 | 46934.1 |
| hypothetical protein | HMPREF1064_03655 | Not Available | - | 4143304 - 4144923 | 62122.6 |
| hypothetical protein | HMPREF1064_03656 | Not Available | + | 4145251 - 4145420 | 6943.29 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | HMPREF1064_03657 | Not Available | + | 4145648 - 4147336 | 60889.9 |
| hypothetical protein | HMPREF1064_03658 | Not Available | + | 4147356 - 4147913 | 21450.9 |
| hypothetical protein | HMPREF1064_03659 | Not Available | + | 4147940 - 4148149 | 7672.37 |
| ribonucleoside-diphosphate reductase, alpha subunit | HMPREF1064_03660 | Not Available | + | 4148552 - 4151071 | 95610.5 |
| ribonucleoside-diphosphate reductase subunit beta | HMPREF1064_03661 | Not Available | + | 4151234 - 4152283 | 41420.9 |
| 5,10-methylenetetrahydrofolate reductase | HMPREF1064_03662 | Not Available | - | 4152376 - 4153329 | 35804.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
