Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03633 | Not Available | - | 4117356 - 4118789 | 53893.1 |
| hypothetical protein | HMPREF1064_03634 | Not Available | - | 4118852 - 4121050 | 86099.7 |
| glutamine synthetase | HMPREF1064_03635 | Not Available | + | 4121226 - 4123415 | 82875.2 |
| hypothetical protein | HMPREF1064_03636 | Not Available | + | 4123577 - 4124278 | 26605.4 |
| hypothetical protein | HMPREF1064_03637 | Not Available | + | 4124410 - 4124562 | 5497.81 |
| hypothetical protein | HMPREF1064_03638 | Not Available | + | 4124595 - 4125107 | 19740.4 |
| 3-deoxy-8-phosphooctulonate synthase | HMPREF1064_03639 | Not Available | - | 4125270 - 4126067 | 28907.3 |
| yegs//bmru family lipid kinase | HMPREF1064_03640 | Not Available | - | 4126140 - 4127069 | 35359.1 |
| trna dimethylallyltransferase 2 | HMPREF1064_03641 | Not Available | - | 4127075 - 4127998 | 35639.2 |
| glyceraldehyde-3-phosphate dehydrogenase a | HMPREF1064_03642 | Not Available | - | 4128119 - 4129129 | 35961.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
