Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03615 | Not Available | - | 4089183 - 4089980 | 29552.0 |
| spermidine/putrescine import atp-binding protein pota | HMPREF1064_03616 | Not Available | - | 4089993 - 4091381 | 51718.0 |
| hypothetical protein | HMPREF1064_03617 | Not Available | - | 4091818 - 4092108 | 11022.0 |
| hypothetical protein | HMPREF1064_03618 | Not Available | - | 4092105 - 4092848 | 28909.9 |
| hypothetical protein | HMPREF1064_03619 | Not Available | - | 4093055 - 4093255 | 7675.58 |
| hypothetical protein | HMPREF1064_03620 | Not Available | + | 4093425 - 4094543 | 41317.4 |
| alpha-glucan phosphorylase | HMPREF1064_03621 | Not Available | - | 4094786 - 4097350 | 98182.8 |
| hypothetical protein | HMPREF1064_03622 | Not Available | - | 4097379 - 4099049 | 63658.0 |
| hypothetical protein | HMPREF1064_03623 | Not Available | - | 4099304 - 4099768 | 15421.2 |
| hypothetical protein | HMPREF1064_03624 | Not Available | - | 4099982 - 4101787 | 67199.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
