Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | + | 4071909 - 4071992 | Not Available |
| Trna-gly | Not Available | Not Available | + | 4072037 - 4072109 | Not Available |
| carboxynorspermidine decarboxylase | HMPREF1064_03597 | Not Available | - | 4072284 - 4073447 | 44279.9 |
| hypothetical protein | HMPREF1064_03598 | Not Available | - | 4073475 - 4075865 | 91413.7 |
| superoxide dismutase | HMPREF1064_03599 | Not Available | + | 4075974 - 4076591 | 23289.6 |
| thiamine biosynthesis protein this | HMPREF1064_03600 | Not Available | + | 4076979 - 4077179 | 7169.82 |
| thiamine-phosphate pyrophosphorylase | HMPREF1064_03601 | Not Available | + | 4077169 - 4077795 | 23084.9 |
| thiazole synthase | HMPREF1064_03602 | Not Available | + | 4077813 - 4078586 | 27561.6 |
| phosphomethylpyrimidine synthase | HMPREF1064_03603 | Not Available | + | 4078598 - 4080295 | 63328.5 |
| hypothetical protein | HMPREF1064_03604 | Not Available | + | 4080308 - 4080835 | 19924.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
