Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter, rnd family, mfp subunit | HMPREF1064_03591 | Not Available | - | 4062455 - 4063705 | 47651.5 |
| hypothetical protein | HMPREF1064_03592 | Not Available | - | 4063710 - 4065017 | 50330.3 |
| hypothetical protein | HMPREF1064_03593 | Not Available | + | 4065349 - 4066680 | 50009.6 |
| hypothetical protein | HMPREF1064_03594 | Not Available | + | 4066710 - 4068008 | 49078.0 |
| hypothetical protein | HMPREF1064_03595 | Not Available | - | 4068134 - 4069666 | 59311.0 |
| hypothetical protein | HMPREF1064_03596 | Not Available | + | 4069872 - 4071374 | 56104.3 |
| Trna-gly | Not Available | Not Available | + | 4071496 - 4071571 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4071584 - 4071667 | Not Available |
| Trna-gly | Not Available | Not Available | + | 4071715 - 4071787 | Not Available |
| Trna-leu | Not Available | Not Available | + | 4071801 - 4071887 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
