Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03451 | Not Available | + | 3931810 - 3932709 | 34987.9 |
| hypothetical protein | HMPREF1064_03452 | Not Available | + | 3932724 - 3933518 | 29458.4 |
| hypothetical protein | HMPREF1064_03453 | Not Available | - | 3933708 - 3934277 | 21943.8 |
| had hydrolase, family ia | HMPREF1064_03454 | Not Available | + | 3934359 - 3934988 | 23346.0 |
| hypothetical protein | HMPREF1064_03455 | Not Available | - | 3935176 - 3935946 | 29210.5 |
| hypothetical protein | HMPREF1064_03456 | Not Available | - | 3935943 - 3937007 | 39519.9 |
| hypothetical protein | HMPREF1064_03457 | Not Available | - | 3937004 - 3937354 | 13228.3 |
| hypothetical protein | HMPREF1064_03458 | Not Available | - | 3937547 - 3938179 | 23052.9 |
| excisionase family dna binding domain-containing protein | HMPREF1064_03459 | Not Available | - | 3938214 - 3938525 | 11887.3 |
| hypothetical protein | HMPREF1064_03460 | Not Available | - | 3938699 - 3939880 | 44154.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
