Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03421 | Not Available | + | 3902422 - 3903582 | 44314.2 |
| hypothetical protein | HMPREF1064_03422 | Not Available | - | 3903689 - 3904543 | 31823.0 |
| hypothetical protein | HMPREF1064_03423 | Not Available | + | 3904550 - 3904780 | 9056.23 |
| wecb/taga/cpsf family glycosyl transferase | HMPREF1064_03424 | Not Available | - | 3904684 - 3905397 | 27693.8 |
| hypothetical protein | HMPREF1064_03425 | Not Available | - | 3905406 - 3906488 | 40753.4 |
| hypothetical protein | HMPREF1064_03426 | Not Available | - | 3906505 - 3907662 | 44886.3 |
| aspartate racemase | HMPREF1064_03427 | Not Available | - | 3907672 - 3908406 | 27612.7 |
| hypothetical protein | HMPREF1064_03428 | Not Available | - | 3908403 - 3909041 | 24318.9 |
| had phosphoserine phosphatase-like hydrolase, family ib | HMPREF1064_03429 | Not Available | - | 3909014 - 3909610 | 22322.8 |
| hypothetical protein | HMPREF1064_03430 | Not Available | - | 3909664 - 3910797 | 43924.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
