Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03411 | Not Available | - | 3885840 - 3886181 | 13345.0 |
| rlua family pseudouridine synthase | HMPREF1064_03412 | Not Available | - | 3886381 - 3887307 | 35671.1 |
| 23s rrna (uracil-5-)-methyltransferase ruma | HMPREF1064_03413 | Not Available | - | 3887352 - 3888773 | 53930.0 |
| pyruvate, phosphate dikinase | HMPREF1064_03414 | Not Available | + | 3888917 - 3891697 | 102415.0 |
| hypothetical protein | HMPREF1064_03415 | Not Available | + | 3891830 - 3893686 | 68776.2 |
| hypothetical protein | HMPREF1064_03416 | Not Available | + | 3893965 - 3894402 | 17339.3 |
| hypothetical protein | HMPREF1064_03417 | Not Available | - | 3894463 - 3896775 | 87470.1 |
| hypothetical protein | HMPREF1064_03418 | Not Available | - | 3896796 - 3897470 | 24853.2 |
| hypothetical protein | HMPREF1064_03419 | Not Available | - | 3897505 - 3899814 | 86358.5 |
| hypothetical protein | HMPREF1064_03420 | Not Available | + | 3900136 - 3902241 | 79254.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
