Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03401 | Not Available | - | 3871509 - 3872393 | 33154.2 |
| hypothetical protein | HMPREF1064_03402 | Not Available | - | 3872517 - 3874292 | 66760.8 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_03403 | Not Available | - | 3874481 - 3874984 | 19667.6 |
| hypothetical protein | HMPREF1064_03404 | Not Available | - | 3875143 - 3875757 | 22186.8 |
| udp-n-acetylglucosamine 2-epimerase | HMPREF1064_03405 | Not Available | + | 3875841 - 3876929 | 40299.0 |
| hypothetical protein | HMPREF1064_03406 | Not Available | - | 3877036 - 3878478 | 55238.8 |
| ctp synthase | HMPREF1064_03407 | Not Available | + | 3878640 - 3880238 | 60096.4 |
| inner membrane protein oxaa | HMPREF1064_03408 | Not Available | + | 3880278 - 3882146 | 70969.8 |
| hypothetical protein | HMPREF1064_03409 | Not Available | + | 3882375 - 3884495 | 80009.1 |
| hypothetical protein | HMPREF1064_03410 | Not Available | - | 3884861 - 3885796 | 36509.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
