Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03391 | Not Available | - | 3860560 - 3861387 | 31774.0 |
| hypothetical protein | HMPREF1064_03392 | Not Available | - | 3861610 - 3863937 | 88367.2 |
| aspartate carbamoyltransferase | HMPREF1064_03393 | Not Available | + | 3864098 - 3865039 | 36265.7 |
| aspartate carbamoyltransferase regulatory chain | HMPREF1064_03394 | Not Available | + | 3865049 - 3865516 | 17419.4 |
| hypothetical protein | HMPREF1064_03395 | Not Available | + | 3865522 - 3866109 | 22010.7 |
| hypothetical protein | HMPREF1064_03396 | Not Available | + | 3866119 - 3866838 | 27522.6 |
| serine hydroxymethyltransferase | HMPREF1064_03397 | Not Available | + | 3867095 - 3868375 | 46843.6 |
| mate efflux family protein | HMPREF1064_03398 | Not Available | + | 3868576 - 3869919 | 49329.3 |
| hypothetical protein | HMPREF1064_03399 | Not Available | + | 3869968 - 3870687 | 24484.1 |
| monofunctional biosynthetic peptidoglycan transglycosylase | HMPREF1064_03400 | Not Available | + | 3870815 - 3871537 | 27943.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
