Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03381 | Not Available | - | 3850302 - 3851588 | 48608.5 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | HMPREF1064_03382 | Not Available | - | 3851589 - 3852347 | 28053.5 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase | HMPREF1064_03383 | Not Available | + | 3852426 - 3852800 | 14179.0 |
| hypothetical protein | HMPREF1064_03384 | Not Available | + | 3853246 - 3853863 | 23919.0 |
| hypothetical protein | HMPREF1064_03385 | Not Available | + | 3853860 - 3855158 | 49763.8 |
| hypothetical protein | HMPREF1064_03386 | Not Available | + | 3855145 - 3856041 | 33099.5 |
| hypothetical protein | HMPREF1064_03387 | Not Available | + | 3856050 - 3857504 | 54522.0 |
| hypothetical protein | HMPREF1064_03388 | Not Available | + | 3857527 - 3858633 | 41414.4 |
| hypothetical protein | HMPREF1064_03389 | Not Available | + | 3858646 - 3859752 | 41382.8 |
| fructose-6-phosphate aldolase | HMPREF1064_03390 | Not Available | + | 3859851 - 3860507 | 23497.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
