Phocaeicola dorei CL02T12C06

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Bacteroidaceae

Genus

Phocaeicola

Description

Phocaeicola dorei CL02T12C06 is a Gram-negative, nonsporulating rod-shaped bacterium that thrives optimally at 37.0°C and is classified as a chemoheterotroph, utilizing organic compounds for energy. This anaerobic microbe demonstrates a versatile habitat preference, suggesting adaptability to various environments. As a member of the Phocaeicola genus, P. dorei CL02T12C06 contributes to the complex microbial communities in its diverse habitats. Its anaerobic metabolism indicates a potential role in environments where oxygen is limited, such as the gastrointestinal tracts of various organisms or in sediment layers of aquatic ecosystems. The ability to thrive in multiple habitats may reflect its ecological significance, particularly in nutrient cycling and organic matter decomposition. Further studies into the specific roles and interactions of P. dorei CL02T12C06 within its ecosystems could reveal insights into its contributions to microbial diversity and functionality in anaerobic environments.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyBacteroidaceae
GenusPhocaeicola
SpeciesPhocaeicola dorei
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranesNot Available
Image of Phocaeicola dorei CL02T12C06
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceChemoheterotroph
PathogenicityNot Available

Genome Summary

Phocaeicola dorei CL02T12C06

Accession NumberAGXJ00000000.1

Gene Summary

Adenine Count

1756647 bp

Thymine Count

1710049 bp

Guanine Count

1247135 bp

Cytosine Count

1283480 bp

Genome Length

5997311 bp

Protein-coding Genes

5172 genes

Non-Coding Genes

147 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
glycoprotease/kae1 family metallohydrolaseHMPREF1064_03333Not Available+3798345 - 379936436940.3
competence/damage-inducible protein cina domainHMPREF1064_03334Not Available+3799387 - 379988717498.8
50s ribosomal protein l28HMPREF1064_03335Not Available+3799992 - 38002529789.04
50s ribosomal protein l33HMPREF1064_03336Not Available+3800273 - 38004617205.97
hypothetical proteinHMPREF1064_03337Not Available+3800471 - 38006265827.19
signal recognition particle-docking protein ftsyHMPREF1064_03338Not Available+3800799 - 380175834702.9
ribosomal protein s12 methylthiotransferase rimoHMPREF1064_03339Not Available+3801762 - 380306050044.1
hypothetical proteinHMPREF1064_03340Not Available+3803134 - 380340610230.6
hypothetical proteinHMPREF1064_03341Not Available+3803432 - 380485652652.2
hypothetical proteinHMPREF1064_03342Not Available+3805139 - 380613437374.8

Displaying genes 3441 – 3450 of 5319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites