Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycoprotease/kae1 family metallohydrolase | HMPREF1064_03333 | Not Available | + | 3798345 - 3799364 | 36940.3 |
| competence/damage-inducible protein cina domain | HMPREF1064_03334 | Not Available | + | 3799387 - 3799887 | 17498.8 |
| 50s ribosomal protein l28 | HMPREF1064_03335 | Not Available | + | 3799992 - 3800252 | 9789.04 |
| 50s ribosomal protein l33 | HMPREF1064_03336 | Not Available | + | 3800273 - 3800461 | 7205.97 |
| hypothetical protein | HMPREF1064_03337 | Not Available | + | 3800471 - 3800626 | 5827.19 |
| signal recognition particle-docking protein ftsy | HMPREF1064_03338 | Not Available | + | 3800799 - 3801758 | 34702.9 |
| ribosomal protein s12 methylthiotransferase rimo | HMPREF1064_03339 | Not Available | + | 3801762 - 3803060 | 50044.1 |
| hypothetical protein | HMPREF1064_03340 | Not Available | + | 3803134 - 3803406 | 10230.6 |
| hypothetical protein | HMPREF1064_03341 | Not Available | + | 3803432 - 3804856 | 52652.2 |
| hypothetical protein | HMPREF1064_03342 | Not Available | + | 3805139 - 3806134 | 37374.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
