Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03323 | Not Available | + | 3789838 - 3790464 | 22583.1 |
| hypothetical protein | HMPREF1064_03324 | Not Available | - | 3790601 - 3790768 | 6136.53 |
| hypothetical protein | HMPREF1064_03325 | Not Available | - | 3790804 - 3792141 | 49951.4 |
| glycine betaine/l-proline transport atp binding subunit | HMPREF1064_03326 | Not Available | + | 3792441 - 3793667 | 45617.2 |
| hypothetical protein | HMPREF1064_03327 | Not Available | + | 3793664 - 3794488 | 29552.8 |
| hypothetical protein | HMPREF1064_03328 | Not Available | + | 3794491 - 3795333 | 31627.2 |
| hypothetical protein | HMPREF1064_03329 | Not Available | + | 3795478 - 3796386 | 34069.1 |
| hypothetical protein | HMPREF1064_03330 | Not Available | + | 3796399 - 3796950 | 20072.3 |
| hypothetical protein | HMPREF1064_03331 | Not Available | - | 3797010 - 3797228 | 8234.71 |
| methionine aminopeptidase, type i | HMPREF1064_03332 | Not Available | + | 3797493 - 3798320 | 30719.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
