Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03313 | Not Available | - | 3776451 - 3778238 | 69837.1 |
| alpha,alpha-trehalose-phosphate synthase (udp-forming) | HMPREF1064_03314 | Not Available | - | 3778258 - 3780510 | 86478.0 |
| hypothetical protein | HMPREF1064_03315 | Not Available | + | 3780871 - 3782217 | 50986.9 |
| hypothetical protein | HMPREF1064_03316 | Not Available | + | 3782627 - 3783262 | 24098.7 |
| hypothetical protein | HMPREF1064_03317 | Not Available | + | 3783299 - 3783988 | 26281.0 |
| hypothetical protein | HMPREF1064_03318 | Not Available | - | 3784134 - 3784835 | 25520.1 |
| hypothetical protein | HMPREF1064_03319 | Not Available | - | 3784963 - 3785076 | 4202.37 |
| potassium-transporting atpase c chain | HMPREF1064_03320 | Not Available | - | 3785106 - 3785675 | 20586.8 |
| k+-transporting atpase, b subunit | HMPREF1064_03321 | Not Available | - | 3785689 - 3787722 | 72448.0 |
| potassium-transporting atpase a chain | HMPREF1064_03322 | Not Available | - | 3787756 - 3789462 | 61988.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
