Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03243 | Not Available | + | 3704185 - 3704730 | 20365.6 |
| hypothetical protein | HMPREF1064_03244 | Not Available | - | 3705284 - 3706129 | 33707.6 |
| flavodoxin | HMPREF1064_03245 | Not Available | + | 3707654 - 3708157 | 17898.0 |
| hypothetical protein | HMPREF1064_03246 | Not Available | + | 3708174 - 3708521 | 13525.7 |
| hypothetical protein | HMPREF1064_03247 | Not Available | - | 3708460 - 3708582 | 4758.95 |
| hypothetical protein | HMPREF1064_03248 | Not Available | + | 3708684 - 3708830 | 5241.18 |
| hypothetical protein | HMPREF1064_03249 | Not Available | + | 3708850 - 3709146 | 11652.1 |
| aspartyl-trna synthetase | HMPREF1064_03250 | Not Available | + | 3709281 - 3711044 | 66543.9 |
| methylated-dna-[protein]-cysteine s-methyltransferase | HMPREF1064_03251 | Not Available | + | 3711219 - 3711746 | 19706.0 |
| hypothetical protein | HMPREF1064_03252 | Not Available | - | 3711840 - 3712430 | 21473.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
