Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | + | 3693154 - 3693231 | Not Available |
| hypothetical protein | HMPREF1064_03234 | Not Available | + | 3693371 - 3693583 | 8232.44 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_03235 | Not Available | + | 3694137 - 3697736 | 133600.0 |
| hypothetical protein | HMPREF1064_03236 | Not Available | + | 3697748 - 3699373 | 61556.8 |
| hypothetical protein | HMPREF1064_03237 | Not Available | + | 3699554 - 3700081 | 20468.6 |
| hypothetical protein | HMPREF1064_03238 | Not Available | - | 3700091 - 3700918 | 31793.5 |
| drug resistance transporter, bcr/cfla subfamily | HMPREF1064_03239 | Not Available | - | 3700932 - 3702116 | 42702.3 |
| hypothetical protein | HMPREF1064_03240 | Not Available | + | 3702355 - 3703206 | 33356.5 |
| hypothetical protein | HMPREF1064_03241 | Not Available | + | 3703328 - 3703921 | 21458.8 |
| hypothetical protein | HMPREF1064_03242 | Not Available | + | 3703949 - 3704167 | 8409.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
