Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03224 | Not Available | - | 3676022 - 3676696 | 24797.0 |
| hypothetical protein | HMPREF1064_03225 | Not Available | - | 3676715 - 3679078 | 90310.1 |
| hypothetical protein | HMPREF1064_03226 | Not Available | - | 3679097 - 3681496 | 91772.0 |
| hypothetical protein | HMPREF1064_03227 | Not Available | - | 3681517 - 3683886 | 90081.8 |
| hypothetical protein | HMPREF1064_03228 | Not Available | - | 3683900 - 3686296 | 92818.7 |
| efflux transporter, rnd family, mfp subunit | HMPREF1064_03229 | Not Available | - | 3686307 - 3687557 | 48023.3 |
| hypothetical protein | HMPREF1064_03230 | Not Available | - | 3687642 - 3689111 | 55930.4 |
| hypothetical protein | HMPREF1064_03231 | Not Available | - | 3689159 - 3690082 | 34947.7 |
| hypothetical protein | HMPREF1064_03232 | Not Available | + | 3690305 - 3691672 | 51918.1 |
| hypothetical protein | HMPREF1064_03233 | Not Available | + | 3691669 - 3693000 | 50470.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
