Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03214 | Not Available | + | 3663128 - 3663622 | 18414.2 |
| had hydrolase, family ia | HMPREF1064_03215 | Not Available | + | 3663781 - 3664401 | 23485.9 |
| hypothetical protein | HMPREF1064_03216 | Not Available | - | 3664402 - 3665574 | 45473.9 |
| queuine trna-ribosyltransferase | HMPREF1064_03217 | Not Available | - | 3665585 - 3666715 | 42665.6 |
| atp-dependent protease la | HMPREF1064_03218 | Not Available | - | 3666718 - 3669195 | 92593.3 |
| trna (adenine-n(6)-)-methyltransferase | HMPREF1064_03219 | Not Available | + | 3669377 - 3670081 | 26331.5 |
| yegs//bmru family lipid kinase | HMPREF1064_03220 | Not Available | - | 3670164 - 3671198 | 38111.1 |
| 8-amino-7-oxononanoate synthase | HMPREF1064_03221 | Not Available | + | 3671442 - 3672629 | 44204.9 |
| hypothetical protein | HMPREF1064_03222 | Not Available | + | 3672716 - 3673603 | 31780.7 |
| hypothetical protein | HMPREF1064_03223 | Not Available | - | 3673611 - 3675962 | 90282.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
