Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cobyrinic acid a,c-diamide synthase | HMPREF1064_03118 | Not Available | + | 3589224 - 3590552 | 49188.8 |
| atp:cob(i)alamin adenosyltransferase | HMPREF1064_03119 | Not Available | + | 3590549 - 3591124 | 22265.0 |
| cobyric acid synthase | HMPREF1064_03120 | Not Available | + | 3591124 - 3592614 | 55380.7 |
| threonine-phosphate decarboxylase | HMPREF1064_03121 | Not Available | + | 3592607 - 3593617 | 38704.6 |
| cobalamin biosynthesis protein cobd | HMPREF1064_03122 | Not Available | + | 3593599 - 3594531 | 34323.7 |
| Trna-gly | Not Available | Not Available | + | 3594567 - 3594642 | Not Available |
| hypothetical protein | HMPREF1064_03123 | Not Available | + | 3594797 - 3596011 | 47075.9 |
| hypothetical protein | HMPREF1064_03124 | Not Available | + | 3596011 - 3596175 | 6407.91 |
| hypothetical protein | HMPREF1064_03125 | Not Available | - | 3596238 - 3596705 | 17485.8 |
| hypothetical protein | HMPREF1064_03126 | Not Available | - | 3596710 - 3598155 | 56911.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
