Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03108 | Not Available | - | 3573886 - 3575418 | 55935.1 |
| hypothetical protein | HMPREF1064_03109 | Not Available | - | 3575421 - 3575936 | 19041.9 |
| acetyl-coa carboxylase, biotin carboxylase subunit | HMPREF1064_03110 | Not Available | - | 3575961 - 3577472 | 57122.8 |
| hypothetical protein | HMPREF1064_03111 | Not Available | - | 3577438 - 3577689 | 9673.73 |
| anaerobic ribonucleoside-triphosphate reductase | HMPREF1064_03112 | Not Available | + | 3578401 - 3580494 | 80525.2 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | HMPREF1064_03113 | Not Available | + | 3580478 - 3580945 | 17754.3 |
| hypothetical protein | HMPREF1064_03114 | Not Available | - | 3580995 - 3582191 | 45152.6 |
| hypothetical protein | HMPREF1064_03115 | Not Available | - | 3582225 - 3584285 | 78271.4 |
| hypothetical protein | HMPREF1064_03116 | Not Available | - | 3584658 - 3586835 | 81212.4 |
| aspt/yide/ybjl antiporter duplication domain-containing protein | HMPREF1064_03117 | Not Available | - | 3587247 - 3588935 | 60770.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
