Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamyl-trna synthetase | HMPREF1064_03098 | Not Available | - | 3562676 - 3564193 | 57935.2 |
| hypothetical protein | HMPREF1064_03099 | Not Available | + | 3564275 - 3566332 | 79106.8 |
| hypothetical protein | HMPREF1064_03100 | Not Available | - | 3566307 - 3566777 | 17933.4 |
| hypothetical protein | HMPREF1064_03101 | Not Available | - | 3566785 - 3567495 | 26461.0 |
| primosomal protein n' | HMPREF1064_03102 | Not Available | - | 3567543 - 3570005 | 94103.5 |
| hypothetical protein | HMPREF1064_03103 | Not Available | - | 3570078 - 3570686 | 21810.8 |
| hypothetical protein | HMPREF1064_03104 | Not Available | - | 3570850 - 3571071 | 8716.91 |
| atp:cob(i)alamin adenosyltransferase | HMPREF1064_03105 | Not Available | - | 3571143 - 3571706 | 21319.7 |
| hypothetical protein | HMPREF1064_03106 | Not Available | - | 3571715 - 3572338 | 24683.8 |
| hypothetical protein | HMPREF1064_03107 | Not Available | + | 3572443 - 3573753 | 50833.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
