Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_03078 | Not Available | - | 3540785 - 3540979 | 7810.9 |
| hypothetical protein | HMPREF1064_03079 | Not Available | + | 3541077 - 3542495 | 51545.1 |
| hypothetical protein | HMPREF1064_03080 | Not Available | - | 3542492 - 3543316 | 31846.3 |
| hypothetical protein | HMPREF1064_03081 | Not Available | - | 3543663 - 3545027 | 49169.4 |
| hypothetical protein | HMPREF1064_03082 | Not Available | + | 3545123 - 3545509 | 14852.5 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_03083 | Not Available | - | 3545590 - 3546093 | 19793.6 |
| hypothetical protein | HMPREF1064_03084 | Not Available | - | 3546262 - 3548736 | 91711.6 |
| hypothetical protein | HMPREF1064_03085 | Not Available | - | 3548826 - 3549296 | 18287.6 |
| hypothetical protein | HMPREF1064_03086 | Not Available | - | 3549371 - 3549502 | 4775.12 |
| peptide chain release factor 2 | HMPREF1064_03087 | Not Available | - | 3549595 - 3550710 | 42535.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
