Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02345 | Not Available | - | 2800998 - 2801756 | 28511.2 |
| excisionase family dna binding domain-containing protein | HMPREF1064_02346 | Not Available | + | 2801844 - 2802404 | 21598.6 |
| hypothetical protein | HMPREF1064_02347 | Not Available | + | 2802401 - 2803654 | 48038.4 |
| hypothetical protein | HMPREF1064_02348 | Not Available | + | 2803785 - 2804021 | 8951.14 |
| hypothetical protein | HMPREF1064_02349 | Not Available | + | 2804040 - 2809454 | 210606.0 |
| hypothetical protein | HMPREF1064_02350 | Not Available | + | 2809480 - 2809683 | 8082.64 |
| hypothetical protein | HMPREF1064_02351 | Not Available | + | 2809684 - 2810634 | 36943.1 |
| hypothetical protein | HMPREF1064_02352 | Not Available | + | 2810815 - 2812359 | 58743.6 |
| hypothetical protein | HMPREF1064_02353 | Not Available | + | 2812362 - 2814710 | 88236.1 |
| excisionase family dna binding domain-containing protein | HMPREF1064_02354 | Not Available | + | 2815007 - 2815366 | 14088.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
