Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02315 | Not Available | - | 2770252 - 2771382 | 43382.7 |
| hypothetical protein | HMPREF1064_02316 | Not Available | - | 2771421 - 2771534 | 4392.39 |
| translation elongation factor g | HMPREF1064_02317 | Not Available | + | 2771567 - 2773726 | 80532.6 |
| sensor protein rprx | HMPREF1064_02318 | Not Available | + | 2773959 - 2775557 | 60906.9 |
| transcriptional regulatory protein rpry | HMPREF1064_02319 | Not Available | + | 2775559 - 2776257 | 26811.6 |
| hypothetical protein | HMPREF1064_02320 | Not Available | - | 2776728 - 2776910 | 6168.02 |
| hypothetical protein | HMPREF1064_02321 | Not Available | - | 2777019 - 2777465 | 17228.0 |
| 30s ribosomal protein s6 | HMPREF1064_02322 | Not Available | + | 2777675 - 2778019 | 13427.3 |
| 30s ribosomal protein s18 | HMPREF1064_02323 | Not Available | + | 2778022 - 2778291 | 10561.2 |
| 50s ribosomal protein l9 | HMPREF1064_02324 | Not Available | + | 2778307 - 2778750 | 16173.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
