Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02305 | Not Available | + | 2756413 - 2758458 | 77174.3 |
| hypothetical protein | HMPREF1064_02306 | Not Available | + | 2758486 - 2760423 | 72602.6 |
| hypothetical protein | HMPREF1064_02307 | Not Available | - | 2760455 - 2761486 | 39226.1 |
| hypothetical protein | HMPREF1064_02308 | Not Available | - | 2761493 - 2764168 | 102209.0 |
| hypothetical protein | HMPREF1064_02309 | Not Available | - | 2764176 - 2765066 | 33758.5 |
| hypothetical protein | HMPREF1064_02310 | Not Available | - | 2765093 - 2765500 | 15515.8 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_02311 | Not Available | - | 2765556 - 2766182 | 24869.6 |
| hypothetical protein | HMPREF1064_02312 | Not Available | - | 2766235 - 2767221 | 38311.2 |
| hypothetical protein | HMPREF1064_02313 | Not Available | - | 2767228 - 2769879 | 100679.0 |
| hypothetical protein | HMPREF1064_02314 | Not Available | - | 2769923 - 2770114 | 7356.48 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
