Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar (glycoside-pentoside-hexuronide) transporter | HMPREF1064_02295 | Not Available | + | 2736334 - 2737872 | 56265.9 |
| hypothetical protein | HMPREF1064_02296 | Not Available | + | 2737912 - 2739039 | 42212.6 |
| xylosidase/arabinosidase | HMPREF1064_02297 | Not Available | + | 2739052 - 2740023 | 36816.1 |
| hypothetical protein | HMPREF1064_02298 | Not Available | + | 2740211 - 2742109 | 71151.4 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_02299 | Not Available | + | 2742151 - 2745222 | 113079.0 |
| hypothetical protein | HMPREF1064_02300 | Not Available | + | 2745237 - 2747171 | 71559.0 |
| hypothetical protein | HMPREF1064_02301 | Not Available | - | 2747798 - 2751850 | 154782.0 |
| hypothetical protein | HMPREF1064_02302 | Not Available | + | 2752088 - 2752210 | 4314.69 |
| hypothetical protein | HMPREF1064_02303 | Not Available | + | 2752226 - 2753809 | 60270.7 |
| hypothetical protein | HMPREF1064_02304 | Not Available | + | 2753822 - 2756416 | 99316.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
