Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| methionyl-trna formyltransferase | HMPREF1064_02285 | Not Available | + | 2725380 - 2726354 | 36678.6 |
| hypothetical protein | HMPREF1064_02286 | Not Available | - | 2726500 - 2727282 | 29049.7 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_02287 | Not Available | + | 2727440 - 2727982 | 20869.1 |
| hypothetical protein | HMPREF1064_02288 | Not Available | + | 2727985 - 2729280 | 48197.7 |
| ribulose-phosphate 3-epimerase | HMPREF1064_02289 | Not Available | + | 2729356 - 2730009 | 23985.5 |
| hypothetical protein | HMPREF1064_02290 | Not Available | + | 2730056 - 2731975 | 72795.8 |
| hypothetical protein | HMPREF1064_02291 | Not Available | + | 2732025 - 2733065 | 39390.4 |
| hypothetical protein | HMPREF1064_02292 | Not Available | + | 2733148 - 2733783 | 24065.5 |
| phosphoglucosamine mutase | HMPREF1064_02293 | Not Available | + | 2733780 - 2735168 | 50489.7 |
| hypothetical protein | HMPREF1064_02294 | Not Available | + | 2735260 - 2736051 | 30536.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
