Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | HMPREF1064_02275 | Not Available | + | 2708642 - 2709544 | 35395.2 |
| hypothetical protein | HMPREF1064_02276 | Not Available | + | 2709546 - 2711057 | 58359.2 |
| hypothetical protein | HMPREF1064_02277 | Not Available | + | 2711060 - 2712709 | 62430.9 |
| efflux transporter, rnd family, mfp subunit | HMPREF1064_02278 | Not Available | + | 2712762 - 2713829 | 39240.3 |
| hypothetical protein | HMPREF1064_02279 | Not Available | + | 2713834 - 2716914 | 115265.0 |
| hypothetical protein | HMPREF1064_02280 | Not Available | + | 2716901 - 2718385 | 56900.6 |
| hypothetical protein | HMPREF1064_02281 | Not Available | + | 2718382 - 2721558 | 121059.0 |
| n-acetylglucosamine-6-phosphate deacetylase | HMPREF1064_02282 | Not Available | + | 2721648 - 2722811 | 42282.9 |
| sua5/ycio/yrdc/ywlc family protein | HMPREF1064_02283 | Not Available | + | 2722980 - 2723555 | 21176.4 |
| hypothetical protein | HMPREF1064_02284 | Not Available | + | 2723564 - 2725366 | 67021.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
