Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | HMPREF1064_02245 | Not Available | + | 2681172 - 2682029 | 32006.2 |
| peptide chain release factor 3 | HMPREF1064_02246 | Not Available | + | 2682036 - 2683604 | 59968.5 |
| hypothetical protein | HMPREF1064_02247 | Not Available | - | 2683681 - 2684463 | 29051.0 |
| hypothetical protein | HMPREF1064_02248 | Not Available | + | 2684570 - 2685454 | 32693.2 |
| hypothetical protein | HMPREF1064_02249 | Not Available | - | 2685437 - 2686225 | 28112.9 |
| hypothetical protein | HMPREF1064_02250 | Not Available | + | 2686729 - 2688486 | 66286.0 |
| hypothetical protein | HMPREF1064_02251 | Not Available | + | 2688729 - 2689838 | 41542.5 |
| hypothetical protein | HMPREF1064_02252 | Not Available | - | 2689721 - 2690302 | 21978.4 |
| hypothetical protein | HMPREF1064_02253 | Not Available | - | 2690387 - 2691385 | 38197.5 |
| hypothetical protein | HMPREF1064_02254 | Not Available | + | 2691618 - 2691715 | 3650.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
