Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| peptide chain release factor 1 | HMPREF1064_02225 | Not Available | - | 2648631 - 2649746 | 42004.6 |
| hypothetical protein | HMPREF1064_02226 | Not Available | - | 2649989 - 2651158 | 42706.3 |
| hypothetical protein | HMPREF1064_02227 | Not Available | - | 2652109 - 2653788 | 64275.8 |
| hypothetical protein | HMPREF1064_02228 | Not Available | + | 2653867 - 2655297 | 52383.6 |
| hypothetical protein | HMPREF1064_02229 | Not Available | + | 2655284 - 2655505 | 8766.94 |
| hypothetical protein | HMPREF1064_02230 | Not Available | + | 2655524 - 2656015 | 17847.5 |
| hypothetical protein | HMPREF1064_02231 | Not Available | - | 2656124 - 2658430 | 85969.3 |
| hypothetical protein | HMPREF1064_02232 | Not Available | - | 2658487 - 2659518 | 39607.7 |
| excinuclease abc subunit a | HMPREF1064_02233 | Not Available | - | 2659770 - 2662571 | 104912.0 |
| hypothetical protein | HMPREF1064_02234 | Not Available | + | 2662653 - 2664152 | 58017.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
