Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02215 | Not Available | + | 2636276 - 2638402 | 81101.9 |
| hypothetical protein | HMPREF1064_02216 | Not Available | + | 2638524 - 2639297 | 29710.3 |
| hypothetical protein | HMPREF1064_02217 | Not Available | - | 2639475 - 2641514 | 76800.4 |
| trna dimethylallyltransferase 1 | HMPREF1064_02218 | Not Available | - | 2641523 - 2642425 | 35021.3 |
| hypothetical protein | HMPREF1064_02219 | Not Available | - | 2642477 - 2643040 | 21611.7 |
| acyl-[acyl-carrier-protein]-udp-n- acetylglucosamine o-acyltransferase | HMPREF1064_02220 | Not Available | - | 2643102 - 2643869 | 27768.6 |
| bifunctional enzyme lpxc/fabz | HMPREF1064_02221 | Not Available | - | 2643886 - 2645271 | 51199.2 |
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | HMPREF1064_02222 | Not Available | - | 2645277 - 2646317 | 36860.4 |
| hypothetical protein | HMPREF1064_02223 | Not Available | - | 2646450 - 2647685 | 47203.2 |
| orotidine 5'-phosphate decarboxylase | HMPREF1064_02224 | Not Available | - | 2647776 - 2648594 | 30601.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
