Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02185 | Not Available | + | 2588382 - 2591120 | 102869.0 |
| hypothetical protein | HMPREF1064_02186 | Not Available | + | 2591279 - 2594098 | 106170.0 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_02187 | Not Available | + | 2594299 - 2594814 | 20605.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_02188 | Not Available | + | 2594858 - 2598205 | 122812.0 |
| hypothetical protein | HMPREF1064_02189 | Not Available | + | 2598231 - 2600171 | 71829.0 |
| hypothetical protein | HMPREF1064_02190 | Not Available | + | 2600433 - 2601248 | 30690.6 |
| hypothetical protein | HMPREF1064_02191 | Not Available | + | 2601324 - 2602385 | 40755.1 |
| hypothetical protein | HMPREF1064_02192 | Not Available | + | 2602470 - 2604680 | 83950.1 |
| hypothetical protein | HMPREF1064_02193 | Not Available | + | 2604915 - 2607401 | 93291.6 |
| hypothetical protein | HMPREF1064_02194 | Not Available | + | 2607429 - 2607680 | 9076.98 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
