Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02167 | Not Available | + | 2558732 - 2558899 | 5717.65 |
| hypothetical protein | HMPREF1064_02168 | Not Available | - | 2559078 - 2560271 | 43123.6 |
| riboflavin biosynthesis protein ribba | HMPREF1064_02169 | Not Available | - | 2560396 - 2561610 | 44989.5 |
| hypothetical protein | HMPREF1064_02170 | Not Available | - | 2561613 - 2563463 | 70614.0 |
| hypothetical protein | HMPREF1064_02171 | Not Available | - | 2563595 - 2563981 | 15243.1 |
| Trna-met | Not Available | Not Available | + | 2564185 - 2564261 | Not Available |
| Trna-met | Not Available | Not Available | + | 2564320 - 2564393 | Not Available |
| hypothetical protein | HMPREF1064_02172 | Not Available | + | 2564548 - 2567370 | 107136.0 |
| hypothetical protein | HMPREF1064_02173 | Not Available | + | 2567604 - 2568830 | 46570.6 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_02174 | Not Available | + | 2568855 - 2569400 | 21061.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
