Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02147 | Not Available | - | 2525893 - 2526210 | 12553.9 |
| hypothetical protein | HMPREF1064_02148 | Not Available | + | 2526389 - 2526637 | 9477.66 |
| rna polymerase sigma-70 factor, expansion family 1 | HMPREF1064_02149 | Not Available | - | 2527503 - 2528084 | 23075.8 |
| hypothetical protein | HMPREF1064_02150 | Not Available | + | 2528221 - 2529240 | 39119.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_02151 | Not Available | + | 2529358 - 2532897 | 130861.0 |
| hypothetical protein | HMPREF1064_02152 | Not Available | + | 2532916 - 2534793 | 70190.4 |
| pectate lyase | HMPREF1064_02153 | Not Available | + | 2534886 - 2536394 | 57036.3 |
| hypothetical protein | HMPREF1064_02154 | Not Available | + | 2536403 - 2538643 | 84367.9 |
| hypothetical protein | HMPREF1064_02155 | Not Available | + | 2538700 - 2540817 | 81145.0 |
| hypothetical protein | HMPREF1064_02156 | Not Available | + | 2541091 - 2543442 | 89731.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
