Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02097 | Not Available | + | 2444721 - 2445554 | 31812.4 |
| hypothetical protein | HMPREF1064_02098 | Not Available | + | 2445678 - 2446631 | 38449.4 |
| hypothetical protein | HMPREF1064_02099 | Not Available | + | 2446682 - 2446783 | 3887.35 |
| hypothetical protein | HMPREF1064_02100 | Not Available | - | 2446788 - 2448104 | 49359.3 |
| efflux transporter, rnd family, mfp subunit | HMPREF1064_02101 | Not Available | - | 2448117 - 2449211 | 40037.4 |
| hypothetical protein | HMPREF1064_02102 | Not Available | - | 2449285 - 2450526 | 45564.9 |
| hypothetical protein | HMPREF1064_02103 | Not Available | - | 2450531 - 2451787 | 46682.1 |
| hypothetical protein | HMPREF1064_02104 | Not Available | - | 2451797 - 2452516 | 26742.3 |
| hypothetical protein | HMPREF1064_02105 | Not Available | - | 2452706 - 2453767 | 41495.6 |
| hypothetical protein | HMPREF1064_02106 | Not Available | + | 2453989 - 2454960 | 34285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
