Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02087 | Not Available | - | 2431110 - 2431955 | 32038.2 |
| hypothetical protein | HMPREF1064_02088 | Not Available | - | 2431959 - 2434652 | 102658.0 |
| glycine-trna ligase | HMPREF1064_02089 | Not Available | + | 2434804 - 2436345 | 59433.1 |
| hypothetical protein | HMPREF1064_02090 | Not Available | + | 2436359 - 2436997 | 23128.3 |
| aspartate-semialdehyde dehydrogenase | HMPREF1064_02091 | Not Available | - | 2437511 - 2438521 | 37279.9 |
| hypothetical protein | HMPREF1064_02092 | Not Available | + | 2438687 - 2440834 | 80182.6 |
| hypothetical protein | HMPREF1064_02093 | Not Available | + | 2440821 - 2441543 | 27156.2 |
| lipoprotein-releasing system atp-binding protein lold | HMPREF1064_02094 | Not Available | + | 2441546 - 2442205 | 23895.1 |
| hypothetical protein | HMPREF1064_02095 | Not Available | - | 2442217 - 2443167 | 35029.5 |
| hypothetical protein | HMPREF1064_02096 | Not Available | - | 2443250 - 2444644 | 51546.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
