Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02078 | Not Available | - | 2418879 - 2419811 | 34858.4 |
| hypothetical protein | HMPREF1064_02079 | Not Available | - | 2419929 - 2420789 | 33451.4 |
| hypothetical protein | HMPREF1064_02080 | Not Available | + | 2421031 - 2422677 | 62711.9 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_02081 | Not Available | + | 2422768 - 2423937 | 42370.6 |
| hypothetical protein | HMPREF1064_02082 | Not Available | + | 2424020 - 2425465 | 55560.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_02083 | Not Available | + | 2425617 - 2427509 | 70860.2 |
| hypothetical protein | HMPREF1064_02084 | Not Available | + | 2427535 - 2429223 | 64041.1 |
| hypothetical protein | HMPREF1064_02085 | Not Available | + | 2429246 - 2429629 | 15543.8 |
| Trna-leu | Not Available | Not Available | + | 2429920 - 2430004 | Not Available |
| hypothetical protein | HMPREF1064_02086 | Not Available | - | 2430073 - 2431101 | 39257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
