Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_02070 | Not Available | + | 2406992 - 2407303 | 11073.6 |
| hypothetical protein | HMPREF1064_02071 | Not Available | + | 2407300 - 2408349 | 37585.5 |
| hypothetical protein | HMPREF1064_02072 | Not Available | + | 2408359 - 2409336 | 35662.8 |
| hypothetical protein | HMPREF1064_02073 | Not Available | + | 2409358 - 2409625 | 10183.1 |
| Trna-ile | Not Available | Not Available | + | 2411382 - 2411458 | Not Available |
| Trna-ala | Not Available | Not Available | + | 2411471 - 2411544 | Not Available |
| marc family membrane protein | HMPREF1064_02074 | Not Available | + | 2414884 - 2415528 | 23824.1 |
| hypothetical protein | HMPREF1064_02075 | Not Available | - | 2415609 - 2416628 | 36789.9 |
| l-fucose:h+ symporter permease | HMPREF1064_02076 | Not Available | - | 2416652 - 2417911 | 47183.0 |
| hypothetical protein | HMPREF1064_02077 | Not Available | - | 2417938 - 2418864 | 35479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
