Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01990 | Not Available | + | 2307350 - 2308021 | 23980.6 |
| hypothetical protein | HMPREF1064_01991 | Not Available | - | 2308276 - 2308734 | 17346.3 |
| hypothetical protein | HMPREF1064_01992 | Not Available | - | 2308731 - 2309261 | 20108.1 |
| sigma-70 family rna polymerase sigma factor | HMPREF1064_01993 | Not Available | - | 2309248 - 2309760 | 20087.0 |
| hypothetical protein | HMPREF1064_01994 | Not Available | - | 2309747 - 2310232 | 18375.6 |
| hypothetical protein | HMPREF1064_01995 | Not Available | - | 2310569 - 2311297 | 27032.1 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | HMPREF1064_01996 | Not Available | - | 2311308 - 2312585 | 47037.8 |
| ybgc/ybaw family acyl-coa thioester hydrolase | HMPREF1064_01997 | Not Available | + | 2312708 - 2313157 | 17237.7 |
| hypothetical protein | HMPREF1064_01998 | Not Available | - | 2313286 - 2314851 | 58958.6 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01999 | Not Available | - | 2314873 - 2318214 | 123142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
