Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | HMPREF1064_01980 | Not Available | + | 2300246 - 2300464 | 8235.14 |
| 50s ribosomal protein l36 | HMPREF1064_01981 | Not Available | + | 2300479 - 2300595 | 4586.82 |
| 30s ribosomal protein s13 | HMPREF1064_01982 | Not Available | + | 2300629 - 2301009 | 14149.3 |
| 30s ribosomal protein s11 | HMPREF1064_01983 | Not Available | + | 2301021 - 2301410 | 13878.8 |
| 30s ribosomal protein s4 | HMPREF1064_01984 | Not Available | + | 2301527 - 2302132 | 22540.2 |
| dna-directed rna polymerase subunit alpha | HMPREF1064_01985 | Not Available | + | 2302144 - 2303136 | 37535.1 |
| 50s ribosomal protein l17 | HMPREF1064_01986 | Not Available | + | 2303140 - 2303628 | 17955.6 |
| hypothetical protein | HMPREF1064_01987 | Not Available | + | 2304042 - 2304467 | 15829.0 |
| hypothetical protein | HMPREF1064_01988 | Not Available | + | 2304585 - 2305124 | 19788.7 |
| hypothetical protein | HMPREF1064_01989 | Not Available | - | 2305219 - 2307123 | 72366.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
