Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l5 | HMPREF1064_01970 | Not Available | + | 2294637 - 2295194 | 20860.8 |
| 30s ribosomal protein s14 | HMPREF1064_01971 | Not Available | + | 2295201 - 2295500 | 11077.7 |
| 30s ribosomal protein s8 | HMPREF1064_01972 | Not Available | + | 2295558 - 2295953 | 14565.0 |
| 50s ribosomal protein l6 | HMPREF1064_01973 | Not Available | + | 2295968 - 2296537 | 20982.6 |
| 50s ribosomal protein l18 | HMPREF1064_01974 | Not Available | + | 2296559 - 2296900 | 12645.5 |
| 30s ribosomal protein s5 | HMPREF1064_01975 | Not Available | + | 2296907 - 2297422 | 17823.9 |
| 50s ribosomal protein l30 | HMPREF1064_01976 | Not Available | + | 2297432 - 2297608 | 6505.28 |
| 50s ribosomal protein l15 | HMPREF1064_01977 | Not Available | + | 2297639 - 2298085 | 15681.0 |
| preprotein translocase, secy subunit | HMPREF1064_01978 | Not Available | + | 2298090 - 2299436 | 49282.7 |
| methionine aminopeptidase, type i | HMPREF1064_01979 | Not Available | + | 2299447 - 2300244 | 29143.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
