Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01960 | Not Available | + | 2290405 - 2290695 | 10832.2 |
| 50s ribosomal protein l2 | HMPREF1064_01961 | Not Available | + | 2290701 - 2291522 | 29634.1 |
| 30s ribosomal protein s19 | HMPREF1064_01962 | Not Available | + | 2291545 - 2291814 | 9895.23 |
| 50s ribosomal protein l22 | HMPREF1064_01963 | Not Available | + | 2291851 - 2292261 | 15484.9 |
| 30s ribosomal protein s3 | HMPREF1064_01964 | Not Available | + | 2292268 - 2292999 | 27103.1 |
| 50s ribosomal protein l16 | HMPREF1064_01965 | Not Available | + | 2293021 - 2293455 | 16206.8 |
| 50s ribosomal protein l29 | HMPREF1064_01966 | Not Available | + | 2293462 - 2293656 | 7453.1 |
| 30s ribosomal protein s17 | HMPREF1064_01967 | Not Available | + | 2293668 - 2293925 | 9981.21 |
| 50s ribosomal protein l14 | HMPREF1064_01968 | Not Available | + | 2293928 - 2294293 | 13058.1 |
| 50s ribosomal protein l24 | HMPREF1064_01969 | Not Available | + | 2294314 - 2294637 | 11660.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
