Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l7/l12 | HMPREF1064_01950 | Not Available | + | 2276186 - 2276560 | 12654.2 |
| dna-directed rna polymerase subunit beta | HMPREF1064_01951 | Not Available | + | 2276663 - 2280475 | 142507.0 |
| dna-directed rna polymerase subunit beta' | HMPREF1064_01952 | Not Available | + | 2280514 - 2284800 | 158832.0 |
| hypothetical protein | HMPREF1064_01953 | Not Available | + | 2285010 - 2285351 | 12561.0 |
| 30s ribosomal protein s12 | HMPREF1064_01954 | Not Available | + | 2285541 - 2285954 | 14994.4 |
| 30s ribosomal protein s7 | HMPREF1064_01955 | Not Available | + | 2286105 - 2286581 | 18220.1 |
| elongation factor g | HMPREF1064_01956 | Not Available | + | 2286613 - 2288730 | 77490.6 |
| 30s ribosomal protein s10 | HMPREF1064_01957 | Not Available | + | 2288813 - 2289118 | 11419.0 |
| 50s ribosomal protein l3 | HMPREF1064_01958 | Not Available | + | 2289140 - 2289757 | 21900.8 |
| 50s ribosomal protein l4 | HMPREF1064_01959 | Not Available | + | 2289757 - 2290383 | 23075.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
