Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01935 | Not Available | + | 2264046 - 2265431 | 53539.9 |
| hypothetical protein | HMPREF1064_01936 | Not Available | + | 2265457 - 2266158 | 26452.2 |
| hypothetical protein | HMPREF1064_01937 | Not Available | - | 2266209 - 2267246 | 40173.0 |
| outer membrane autotransporter barrel domain-containing protein | HMPREF1064_01938 | Not Available | - | 2267280 - 2267771 | 18089.7 |
| hypothetical protein | HMPREF1064_01939 | Not Available | - | 2267817 - 2268341 | 18490.4 |
| hypothetical protein | HMPREF1064_01940 | Not Available | - | 2268351 - 2270168 | 68136.6 |
| 30s ribosomal protein s21 | HMPREF1064_01941 | Not Available | + | 2270301 - 2270492 | 7526.36 |
| tyrosine recombinase xerc | HMPREF1064_01942 | Not Available | + | 2270570 - 2271451 | 33862.4 |
| ribosomal subunit interface protein | HMPREF1064_01943 | Not Available | + | 2271467 - 2271766 | 11371.8 |
| Trna-thr | Not Available | Not Available | + | 2271865 - 2271941 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
