Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMPREF1064_01917 | Not Available | - | 2224835 - 2226433 | 59665.7 |
| hypothetical protein | HMPREF1064_01918 | Not Available | - | 2226550 - 2228181 | 62042.5 |
| susc/raga family tonb-linked outer membrane protein | HMPREF1064_01919 | Not Available | - | 2228226 - 2231264 | 112352.0 |
| hypothetical protein | HMPREF1064_01920 | Not Available | - | 2231287 - 2232786 | 56182.6 |
| hypothetical protein | HMPREF1064_01921 | Not Available | + | 2233000 - 2237040 | 153033.0 |
| hypothetical protein | HMPREF1064_01922 | Not Available | - | 2237289 - 2239028 | 66782.8 |
| hypothetical protein | HMPREF1064_01923 | Not Available | - | 2239035 - 2241314 | 86159.9 |
| hypothetical protein | HMPREF1064_01924 | Not Available | - | 2241317 - 2242729 | 52012.0 |
| hypothetical protein | HMPREF1064_01925 | Not Available | - | 2242755 - 2245088 | 88736.1 |
| hypothetical protein | HMPREF1064_01926 | Not Available | - | 2245108 - 2245920 | 30925.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
