Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola dorei |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Phocaeicola dorei CL02T12C06
Accession NumberAGXJ00000000.1
Gene Summary
Adenine Count
1756647 bp
Thymine Count
1710049 bp
Guanine Count
1247135 bp
Cytosine Count
1283480 bp
Genome Length
5997311 bp
Protein-coding Genes
5172 genes
Non-Coding Genes
147 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl pyrophosphate synthase | HMPREF1064_01859 | Not Available | - | 2128878 - 2129609 | 28131.5 |
| hypothetical protein | HMPREF1064_01860 | Not Available | - | 2129643 - 2131040 | 52235.9 |
| riboflavin biosynthesis protein ribd | HMPREF1064_01861 | Not Available | - | 2131153 - 2132220 | 40275.2 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | HMPREF1064_01862 | Not Available | + | 2132265 - 2133101 | 31727.3 |
| hypothetical protein | HMPREF1064_01863 | Not Available | + | 2133103 - 2133588 | 18844.6 |
| comf family protein | HMPREF1064_01864 | Not Available | + | 2133752 - 2134264 | 18968.1 |
| orotate phosphoribosyltransferase | HMPREF1064_01865 | Not Available | + | 2134364 - 2135002 | 23402.3 |
| hypothetical protein | HMPREF1064_01866 | Not Available | + | 2135100 - 2135504 | 15213.7 |
| argininosuccinate lyase | HMPREF1064_01867 | Not Available | + | 2135520 - 2136860 | 50507.2 |
| hypothetical protein | HMPREF1064_01868 | Not Available | + | 2136884 - 2137876 | 36877.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
